Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842974.1_cds_XP_016508561.1_21569
CDS Infomation

[gene=LOC107826126] [db_xref=GeneID:107826126] [protein=glucan endo-1,3-beta-glucosidase-like] [protein_id=XP_016508561.1] [location=complement(join(24911..24939,25063..25387,27286..28323))] [gbkey=CDS]
Sequence

ATGCCAGACAAAAGACCGTCCCTGTTGTTGCTAATATTGTTTGTTGTTCCTCTGTTTTTC
CCGGCTGTTAATTCTATCGGTGTTAATTATGGCACACTAGGGAACAACCTTCCTCCGCCA
GCTCAAGTTGCTCAGTTTCTCAAAGACAAGACCGTCATAGACCGTATCAAAATCTTCGAC
ATCAACCCCGACATCCTTCGAGCTTTCGCCAACACAGGAATCTCAGTTACCGTCACTGTT
CCAAACGGAGAGATCCCCAACCTCTTGGACATCAGTTATGCTCGCCGATATATCGACGCC
AACATCAAACCCTTTTACCCACAAACCAAGATTGATGTTATTCTTGTGGGAAATGAAGTC
CTCCACTGGGACGGACCAGATATCCAGATGAAGCTGGTTCCTGCCATGAAAACCTTTTAC
CAAGCTCTTGGTCAGTCCGGGTTAAAGGATATCAAGGTCTCCTCTCCTCATTCTCTGGGT
ATCCTTTTAAGATCCAACCCACCTAGCGCCGCGAGGTTTAGGCCTGGTTGGGATGTGGGT
ATTCTGGCCCCTATGCTCCAATTCTTGCGCGAGACAAAAGGACCTTTTATGGTAAACCCT
TACCCATACTTTGGGTACAACCCAAAACAGGAGGACTTCCTTTTATTCAGGAAAAACAAA
GGTGTCTACGACAGGTTTTCTAAGAAATGGTACACAAACTCGTTCGACATGTTGTTAGAT
GCGGTGTATATGTCGATGGTAAGGCTTAAATACCCAGATGTAGAGATTGTAGCAGCGGAG
ACAGGATGGCCATCTCAGGGTGAGTCATTTGAGCCTCAATGTACGGTGGAAAATGCGGCT
TCTTACAATGGTGGGCTGTTGAGGAAGTACAACTCTGAGACAGGGACGCCATTGATGCCG
CACAGGAAGATTGAGACATACATATTCGGATTGTTCAACGAGAACACTAAACCCGGTTCA
ATTGCTGAGAGGAATTTCGGATTGTTTCGCCCGGATTTCACCCCGGTTTACAATATTGGA
GTCTTGAAAGGAGAGCAGGCTCAACCAACACCAGCATTGCCCGCGCCAAGAAATGGTAGT
GGCAACAAAGGGCAACCAACATCACCAGTAAGACCAGCAGAGAGCAAAAAATTCTGCATG
CCGAAAGCCGACGCTACGGATGCACAATTACAATCCAACATAAACTATGTGTGCAGCCAA
GGAGTGGATTGCACCCCAATTCAAGCTGGAGGTCCCTGCTTTAATCCCAACACTATTAGG
TCTCACGCTGCCTTTGCCATGAACTCATACTACCAAAGGGAGGGCCGCAACGCATTCAAC
TGCGACTTTGCCGGTACTGGTGTCGTCGCCTCTACTGATCCAAGTTATGGCACATGCAAA
TTCCAATCCTGA

Peptide Sequence

PEP ID

XP_016508561.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase-like [Nicotiana tabacum]
Sequence

MPDKRPSLLLLILFVVPLFFPAVNSIGVNYGTLGNNLPPPAQVAQFLKDKTVIDRIKIFD
INPDILRAFANTGISVTVTVPNGEIPNLLDISYARRYIDANIKPFYPQTKIDVILVGNEV
LHWDGPDIQMKLVPAMKTFYQALGQSGLKDIKVSSPHSLGILLRSNPPSAARFRPGWDVG
ILAPMLQFLRETKGPFMVNPYPYFGYNPKQEDFLLFRKNKGVYDRFSKKWYTNSFDMLLD
AVYMSMVRLKYPDVEIVAAETGWPSQGESFEPQCTVENAASYNGGLLRKYNSETGTPLMP
HRKIETYIFGLFNENTKPGSIAERNFGLFRPDFTPVYNIGVLKGEQAQPTPALPAPRNGS
GNKGQPTSPVRPAESKKFCMPKADATDAQLQSNINYVCSQGVDCTPIQAGGPCFNPNTIR
SHAAFAMNSYYQREGRNAFNCDFAGTGVVASTDPSYGTCKFQS

Transcript Sequence

Gene sequence data has not been registered.